C39F7.5 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C39F7.5

BACK domain-containing protein. (662 aa)

Predicted Functional Partners:

unc-79

0.679

F22G12.4

0.551

C47D12.2

0.481

T22C1.1

0.407

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C39F7.5	C47D12.2	C39F7.5.1	C47D12.2.1	BACK domain-containing protein.	Uncharacterized protein.	0.481
C39F7.5	F22G12.4	C39F7.5.1	F22G12.4a.1	BACK domain-containing protein.	Uncharacterized protein.	0.551
C39F7.5	T22C1.1	C39F7.5.1	T22C1.1.2	BACK domain-containing protein.	UBR-type domain-containing protein.	0.407
C39F7.5	unc-79	C39F7.5.1	E03A3.6a.1	BACK domain-containing protein.	Uncoordinated protein 79.	0.679
C47D12.2	C39F7.5	C47D12.2.1	C39F7.5.1	Uncharacterized protein.	BACK domain-containing protein.	0.481
C47D12.2	T22C1.1	C47D12.2.1	T22C1.1.2	Uncharacterized protein.	UBR-type domain-containing protein.	0.445
C47D12.2	unc-79	C47D12.2.1	E03A3.6a.1	Uncharacterized protein.	Uncoordinated protein 79.	0.678
F22G12.4	C39F7.5	F22G12.4a.1	C39F7.5.1	Uncharacterized protein.	BACK domain-containing protein.	0.551
T22C1.1	C39F7.5	T22C1.1.2	C39F7.5.1	UBR-type domain-containing protein.	BACK domain-containing protein.	0.407
T22C1.1	C47D12.2	T22C1.1.2	C47D12.2.1	UBR-type domain-containing protein.	Uncharacterized protein.	0.445
T22C1.1	unc-79	T22C1.1.2	E03A3.6a.1	UBR-type domain-containing protein.	Uncoordinated protein 79.	0.678
unc-79	C39F7.5	E03A3.6a.1	C39F7.5.1	Uncoordinated protein 79.	BACK domain-containing protein.	0.679
unc-79	C47D12.2	E03A3.6a.1	C47D12.2.1	Uncoordinated protein 79.	Uncharacterized protein.	0.678
unc-79	T22C1.1	E03A3.6a.1	T22C1.1.2	Uncoordinated protein 79.	UBR-type domain-containing protein.	0.678