Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dsl-1 | lact-7 | W09G12.4.1 | C40H5.4.1 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Beta-lactamase domain-containing protein. | 0.616 |
lact-7 | dsl-1 | C40H5.4.1 | W09G12.4.1 | Beta-lactamase domain-containing protein. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.616 |
lact-7 | mel-32 | C40H5.4.1 | C05D11.11b.2 | Beta-lactamase domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family. | 0.660 |
lact-7 | nsf-1 | C40H5.4.1 | H15N14.2a.1 | Beta-lactamase domain-containing protein. | Vesicle-fusing ATPase; Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin (By similarity); Belongs to the AAA ATPase family. | 0.660 |
mel-32 | lact-7 | C05D11.11b.2 | C40H5.4.1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family. | Beta-lactamase domain-containing protein. | 0.660 |
nsf-1 | lact-7 | H15N14.2a.1 | C40H5.4.1 | Vesicle-fusing ATPase; Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin (By similarity); Belongs to the AAA ATPase family. | Beta-lactamase domain-containing protein. | 0.660 |