Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C41H7.5 | C41H7.6 | C41H7.5a.1 | C41H7.6.1 | LIn-8 Domain containing. | LIn-8 Domain containing. | 0.580 |
C41H7.6 | C41H7.5 | C41H7.6.1 | C41H7.5a.1 | LIn-8 Domain containing. | LIn-8 Domain containing. | 0.580 |
C41H7.6 | cpf-1 | C41H7.6.1 | F28C6.3.2 | LIn-8 Domain containing. | WD_REPEATS_REGION domain-containing protein. | 0.467 |
C41H7.6 | nrde-3 | C41H7.6.1 | R04A9.2.1 | LIn-8 Domain containing. | Nuclear RNAi defective-3 protein; Transports small interfering RNAs (siRNAs) from the cytoplasm to the nucleus. Required for RNA interference (RNAi) in nuclei. Required for exogenous RNAi-induced H3K27 methylation. | 0.567 |
C41H7.6 | tdp-1 | C41H7.6.1 | F44G4.4c.1 | LIn-8 Domain containing. | Tar DNA-binding protein homolog 1; RNA-binding protein which regulates transcription, splicing and RNA-editing. Limits the accumulation of double- stranded RNA by maintaining the abundance of the mature RNA transcripts that are formed from double-stranded precursor RNAs. Stress response protein that acts downstream of daf-16 in the insulin/IGF pathway to regulate longevity and the cellular stress response to osmotic, oxidative, proteotoxic and endoplasmic reticulum stress. Involved in the regulation of physiological processes including aging, fertility, growth and locomotion. | 0.701 |
cpf-1 | C41H7.6 | F28C6.3.2 | C41H7.6.1 | WD_REPEATS_REGION domain-containing protein. | LIn-8 Domain containing. | 0.467 |
nrde-3 | C41H7.6 | R04A9.2.1 | C41H7.6.1 | Nuclear RNAi defective-3 protein; Transports small interfering RNAs (siRNAs) from the cytoplasm to the nucleus. Required for RNA interference (RNAi) in nuclei. Required for exogenous RNAi-induced H3K27 methylation. | LIn-8 Domain containing. | 0.567 |
tdp-1 | C41H7.6 | F44G4.4c.1 | C41H7.6.1 | Tar DNA-binding protein homolog 1; RNA-binding protein which regulates transcription, splicing and RNA-editing. Limits the accumulation of double- stranded RNA by maintaining the abundance of the mature RNA transcripts that are formed from double-stranded precursor RNAs. Stress response protein that acts downstream of daf-16 in the insulin/IGF pathway to regulate longevity and the cellular stress response to osmotic, oxidative, proteotoxic and endoplasmic reticulum stress. Involved in the regulation of physiological processes including aging, fertility, growth and locomotion. | LIn-8 Domain containing. | 0.701 |