STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpo-12Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)    
Predicted Functional Partners:
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.876
rpl-14
Ribosomal_L14e domain-containing protein.
   
 
 0.807
C42C1.19
MFS domain-containing protein.
 
    
 0.789
rpl-27
60S ribosomal protein L27; Component of the large ribosomal subunit.
   
 
 0.769
erl-1
Erlin.
 
 
    0.669
F47B8.10
MFS domain-containing protein.
 
    
 0.648
smr-1
SMN (Survival of Motor Neuron protein) Related.
   
  
 0.646
rpl-6
60S ribosomal protein L6; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.643
rpl-2
60S ribosomal protein L8.
   
 
 0.636
rps-18
Ribosomal Protein, Small subunit; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.620
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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