STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C42C1.19MFS domain-containing protein. (403 aa)    
Predicted Functional Partners:
hpo-12
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
    
 0.789
gpd-4
Glyceraldehyde-3-phosphate dehydrogenase 4.
    
 0.436
gpd-3
Glyceraldehyde-3-phosphate dehydrogenase 3.
    
 0.436
gpd-2
Glyceraldehyde-3-phosphate dehydrogenase 2.
    
 0.436
gpd-1
Glyceraldehyde-3-phosphate dehydrogenase 1.
    
 0.436
thk-1
Thymidine kinase.
    
 0.406
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.