STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-179C-type LECtin. (316 aa)    
Predicted Functional Partners:
clec-164
C-type lectin domain-containing protein.
      
 0.891
clec-39
C-type LECtin.
      
 0.807
srw-43
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 
 0.702
srw-54
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 
 0.699
srz-103
Serpentine Receptor, class Z.
   
  
 0.696
srw-36
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.695
F52G2.3
RSD-2 domain-containing protein.
      
 0.691
Y39C12A.9
J domain-containing protein.
      
 0.691
Y62F5A.10
Uncharacterized protein.
      
 0.691
crld-1
Protein disulfide isomerase crld-1; Protein disulfide isomerase which associates with the unc-29 subunit of levamisole-sensitive nicotinic acetylcholine receptors (L- nAChR) to promote L-nAChR assembly in the endoplasmic reticulum at neuromuscular junctions.
      
 0.610
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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