Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| D2085.4 | let-70 | D2085.4 | M7.1 | E3 ubiquitin-protein ligase etc-1; E3 ubiquitin-protein ligase that accepts ubiquitin from E2 ubiquitin-conjugating enzymes, such as ubc-18, in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Ubiquitinates ify-1 and cyb-1 targeting them for degradation in post-meiotic embryos | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | 0.850 |
| D2085.4 | ndx-7 | D2085.4 | C43E11.7 | E3 ubiquitin-protein ligase etc-1; E3 ubiquitin-protein ligase that accepts ubiquitin from E2 ubiquitin-conjugating enzymes, such as ubc-18, in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Ubiquitinates ify-1 and cyb-1 targeting them for degradation in post-meiotic embryos | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | 0.812 |
| D2085.4 | ubq-1 | D2085.4 | F25B5.4a.2 | E3 ubiquitin-protein ligase etc-1; E3 ubiquitin-protein ligase that accepts ubiquitin from E2 ubiquitin-conjugating enzymes, such as ubc-18, in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Ubiquitinates ify-1 and cyb-1 targeting them for degradation in post-meiotic embryos | Ubiquitin-related; Polyubiquitin-A; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved [...] | 0.760 |
| F25B5.6 | dcap-1 | F25B5.6b | Y55F3AM.12 | Putative folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | 0.924 |
| F25B5.6 | ndx-7 | F25B5.6b | C43E11.7 | Putative folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | 0.927 |
| dcap-1 | F25B5.6 | Y55F3AM.12 | F25B5.6b | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | Putative folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family | 0.924 |
| dcap-1 | ndx-7 | Y55F3AM.12 | C43E11.7 | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | 0.958 |
| dcap-1 | ndx-8 | Y55F3AM.12 | Y87G2A.14 | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | Peroxisomal coenzyme A diphosphatase ndx-8; Coenzyme A diphosphatase which mediates the cleavage of CoA into 3',5'-ADP and 4'-phosphopantetheine; Belongs to the Nudix hydrolase family | 0.480 |
| dcap-1 | rab-10 | Y55F3AM.12 | T23H2.5.2 | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | Ras-related protein Rab-10; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. Required for basolateral endocytic recycling, the return of macromolecules and fluid from endosomes to the plasma membrane, in polarized epithelial cells of the intestine upstream of rm [...] | 0.885 |
| heh-1 | ndx-7 | R148.6 | C43E11.7 | Niemann-pick c2 protein; Protein HEH-1 (heh-1) mRNA, complete cds | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | 0.629 |
| let-70 | D2085.4 | M7.1 | D2085.4 | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | E3 ubiquitin-protein ligase etc-1; E3 ubiquitin-protein ligase that accepts ubiquitin from E2 ubiquitin-conjugating enzymes, such as ubc-18, in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Ubiquitinates ify-1 and cyb-1 targeting them for degradation in post-meiotic embryos | 0.850 |
| let-70 | ndx-7 | M7.1 | C43E11.7 | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | 0.655 |
| let-70 | ndx-8 | M7.1 | Y87G2A.14 | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | Peroxisomal coenzyme A diphosphatase ndx-8; Coenzyme A diphosphatase which mediates the cleavage of CoA into 3',5'-ADP and 4'-phosphopantetheine; Belongs to the Nudix hydrolase family | 0.655 |
| let-70 | prx-5 | M7.1 | C34C6.6a | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | Tpr_region domain-containing protein; PeRoXisome assembly factor; Protein PRX-5, isoform b (prx-5) mRNA, complete cds | 0.800 |
| let-70 | ubq-1 | M7.1 | F25B5.4a.2 | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | Ubiquitin-related; Polyubiquitin-A; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved [...] | 0.993 |
| ndx-7 | D2085.4 | C43E11.7 | D2085.4 | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | E3 ubiquitin-protein ligase etc-1; E3 ubiquitin-protein ligase that accepts ubiquitin from E2 ubiquitin-conjugating enzymes, such as ubc-18, in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Ubiquitinates ify-1 and cyb-1 targeting them for degradation in post-meiotic embryos | 0.812 |
| ndx-7 | F25B5.6 | C43E11.7 | F25B5.6b | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | Putative folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family | 0.927 |
| ndx-7 | dcap-1 | C43E11.7 | Y55F3AM.12 | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | Mrna_decap_c domain-containing protein; mRNA DeCAPping enzyme; Protein DCAP-1 (dcap-1) mRNA, complete cds | 0.958 |
| ndx-7 | heh-1 | C43E11.7 | R148.6 | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | Niemann-pick c2 protein; Protein HEH-1 (heh-1) mRNA, complete cds | 0.629 |
| ndx-7 | let-70 | C43E11.7 | M7.1 | Putative nudix hydrolase 7; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins (By similarity). Mediates the selective degradation of short-lived and abnormal proteins. Plays a role in the DNA damage response. In particular, in response to ionizing radiation, associates with the E3 ubiquitin-protein ligase brc-1- brd-1 heterodimer on chromatin to activate E3-ubiquitin ligase activity of the heterodimer, and thus its DNA damage repair mechanisms; Belongs to the ubiquitin-conjugating enzyme family | 0.655 |
page 1 of 3
