STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmp-2Peroxisomal Membrane Protein related. (661 aa)    
Predicted Functional Partners:
pmp-4
Peroxisomal Membrane Protein related.
  
0.945
pmp-1
Peroxisomal Membrane Protein related.
  
 
0.910
prx-19
Putative peroxisomal biogenesis factor 19; Belongs to the peroxin-19 family.
   
 0.896
rad-51
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA.
   
 
 0.862
prx-3
PeRoXisome assembly factor.
   
 0.824
prx-5
TPR_REGION domain-containing protein.
   
  
 0.739
Y25C1A.13
Uncharacterized protein.
   
  
 0.728
dhs-28
SCP2 domain-containing protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.718
B0294.1
Uncharacterized protein.
      
 0.698
C06C3.12
Uncharacterized protein.
      
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.