STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C45B11.6Epoxide hydrolase. (457 aa)    
Predicted Functional Partners:
srg-42
Serpentine receptor class gamma; Belongs to the nematode receptor-like protein srg family.
   
  
 0.895
C45B11.8
Uncharacterized protein.
      
 0.892
cnc-10
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.892
pks-1
PolyKetide Synthase.
  
 
 0.849
C32H11.9
CUB_2 domain-containing protein.
      
 0.807
H19N07.3
Uncharacterized protein.
      
 0.804
jmjd-5
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.691
F37C12.3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.626
Y56A3A.19
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.626
dod-21
CUB_2 domain-containing protein.
      
 0.581
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.