STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-33C2CYtochrome P450 family; Belongs to the cytochrome P450 family. (495 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.811
nhr-156
Nuclear Hormone Receptor family.
    
 
 0.766
nhr-70
Nuclear Hormone Receptor family.
    
 
 0.750
F27D9.2
MFS domain-containing protein.
      
 0.741
gst-33
Glutathione S-Transferase.
   
  
 0.702
T08H10.1
Aldo_ket_red domain-containing protein.
   
  
 0.696
ptr-13
SSD domain-containing protein.
      
 0.669
F21A3.11
Purple acid phosphatase.
      
 0.666
T19D12.9
MFS domain-containing protein.
   
  
 0.661
Y19D10A.11
annotation not available
   
  
 0.621
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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