STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-33C1CYtochrome P450 family; Belongs to the cytochrome P450 family. (495 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.811
twk-8
TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.807
gst-39
Glutathione S-Transferase.
   
  
 0.770
twk-7
TWiK family of potassium channels protein 7.
      
 0.700
col-45
Col_cuticle_N domain-containing protein.
    
 
 0.677
nhr-10
Nuclear hormone receptor family member nhr-10; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
    
 
 0.676
nhr-62
Nuclear hormone receptor family member nhr-62; Orphan nuclear receptor.
   
 
 0.673
nhr-3
Nuclear hormone receptor family member nhr-3; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
    
 
 0.672
nhr-40
Nuclear hormone receptor family member nhr-40; Orphan nuclear receptor.
    
 
 0.672
vap-1
Venom-Allergen-like Protein; Belongs to the CRISP family.
   
  
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.