STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C46A5.6Uncharacterized protein. (316 aa)    
Predicted Functional Partners:
T19H12.2
Acidic leucine-rich nuclear phosphoprotein 32-related protein 2; Belongs to the ANP32 family.
   
  
 0.917
R04D3.2
Uncharacterized protein.
   
  
 0.915
Y51F10.2
RING-type domain-containing protein.
   
  
 0.883
pbs-7
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
  
 0.747
T26A5.2
Uncharacterized protein.
   
  
 0.708
F35C11.5
Uncharacterized protein.
   
  
 0.707
ZC155.4
GP-PDE domain-containing protein.
   
  
 0.703
R04D3.3
Uncharacterized protein.
   
  
 0.700
T20F5.7
RING-type domain-containing protein.
   
  
 0.697
dao-5
Nucleolar protein dao-5; Nucleolar protein which binds to RNA polymerase I and rDNA and is required for efficient RNA polymerase I-mediated rDNA transcription. Maintains the epigenetically active status of rDNA chromatin which facilitates rDNA transcription and sustains germline development, ensuring fertility. Plays a role in the modulation of nucleolus size. May play a role in the regulation of lifespan. Belongs to the NOLC1 family.
      
 0.691
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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