STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phat-2PHAryngeal gland Toxin-related. (249 aa)    
Predicted Functional Partners:
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.804
C27A2.5
Uncharacterized protein.
   
  
 0.801
D1054.18
Uncharacterized protein.
      
 0.758
C08B6.4
Uncharacterized protein.
   
  
 0.755
abu-14
Activated in Blocked Unfolded protein response.
   
 
 0.738
sulp-3
Sulfate permease family protein 3; Possible sulfate transporter.
   
  
 0.715
F56C9.7
Uncharacterized protein.
      
 0.699
ZC204.12
Uncharacterized protein.
      
 0.699
tni-4
Troponin I 4; Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.
   
  
 0.667
spp-7
SaPosin-like Protein family.
   
  
 0.647
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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