STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C47A4.5Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
Y45F10B.3
Uncharacterized protein.
   
   
0.613
C25D7.1
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.551
ssp-34
Sperm-specific class P protein 34.
   
    0.546
spch-2
SPerm CHromatin enriched.
   
    0.538
K01D12.15
Uncharacterized protein.
   
   
0.538
Y69E1A.1
Uncharacterized protein.
   
    0.538
ZK84.5
Uncharacterized protein.
   
    0.538
C34F11.2
Uncharacterized protein.
   
    0.521
msrp-1
MS Related Protein.
   
    0.515
ssp-16
Sperm-specific class P protein 16.
   
    0.482
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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