STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C47E12.10Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
T25B9.4
Tyrosine-protein kinase.
   
   0.565
F13A7.1
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
   0.560
C18H7.7
Uncharacterized protein.
   
    0.538
K07F5.6
Uncharacterized protein.
   
    0.535
ZK354.6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
   0.532
F33D11.2
Uncharacterized protein.
   
   0.523
pck-3
Phosphoenolypyruvate CarboxyKinase.
   
    0.518
C09B9.2
Uncharacterized protein.
   
   0.497
C09B9.4
Protein kinase domain-containing protein.
   
   0.493
F44G3.7
Uncharacterized protein; Belongs to the serpin family.
   
   0.492
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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