STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C48B6.4Tyrosine-protein phosphatase domain-containing protein. (623 aa)    
Predicted Functional Partners:
B0563.9
Uncharacterized protein.
      
 0.971
F14F8.14
Uncharacterized protein.
      
 0.971
fip-1
Fungus-induced protein 1.
      
 0.891
ent-5
Equilibrative Nucleoside Transporter.
      
 0.810
skr-7
SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family.
      
 0.808
acs-18
AMP-binding domain-containing protein.
   
   0.701
skp-1
Uncharacterized protein T27F2.1.
    
 
 0.668
C47E12.11
Uncharacterized protein.
   
    0.615
ZK892.3
MFS domain-containing protein.
   
    0.615
F31E8.5
Uncharacterized protein.
   
    0.612
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.