Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C48D1.1 | F53G2.1 | C48D1.1a.1 | F53G2.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.668 |
C48D1.1 | F58D2.2 | C48D1.1a.1 | F58D2.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
C48D1.1 | F58D2.4 | C48D1.1a.1 | F58D2.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.911 |
C48D1.1 | H24K24.2 | C48D1.1a.1 | H24K24.2a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.705 |
C48D1.1 | cul-2 | C48D1.1a.1 | ZK520.4c.1 | Uncharacterized protein. | Cullin-2; Core component of multiple cullin-RING-based CBC (Cul2- ElonginB-ElonginC) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the CBC complex depends on the variable substrate recognition component (By similarity). May function in ubiquitin-mediated degradation of CKIs to target cki-1 for degradation. CBC(zif-1) may ensure germline precursor cell [...] | 0.627 |
C48D1.1 | elb-1 | C48D1.1a.1 | Y41C4A.10.1 | Uncharacterized protein. | RNA polymerase II transcription factor SIII p18 subunit. | 0.618 |
C48D1.1 | gadr-3 | C48D1.1a.1 | F47D12.5.1 | Uncharacterized protein. | Gastrulation-defective protein 3. | 0.629 |
C48D1.1 | gadr-4 | C48D1.1a.1 | W06A11.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.645 |
C48D1.1 | vhl-1 | C48D1.1a.1 | F08G12.4.1 | Uncharacterized protein. | Von Hippel-Lindau tumor suppressor homolog; Involved in the response to variation in environmental oxygen levels by targeting the hypoxia-inducible transcription factor hif-1 for proteasomal degradation when oxygen levels are normal (around 20%). By regulating hif-1 expression, plays a role in iron homeostasis, aging, heat acclimation and progeny size. Mediates resistance to enteropathogenic E.coli. Mediates susceptibility to B.thuringiensis pore-forming toxins. Not involved in P.aeruginosa susceptibility. Belongs to the VHL family. | 0.718 |
C48D1.1 | zer-1 | C48D1.1a.1 | T24C4.6b.1 | Uncharacterized protein. | Zyg eleven-related protein 1; Acts as target recruitment subunit in the E3 ubiquitin ligase complex zer-1-cul-2-elc-1. | 0.634 |
F53G2.1 | C48D1.1 | F53G2.1.1 | C48D1.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.668 |
F53G2.1 | H24K24.2 | F53G2.1.1 | H24K24.2a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.559 |
F53G2.1 | cul-2 | F53G2.1.1 | ZK520.4c.1 | Uncharacterized protein. | Cullin-2; Core component of multiple cullin-RING-based CBC (Cul2- ElonginB-ElonginC) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the CBC complex depends on the variable substrate recognition component (By similarity). May function in ubiquitin-mediated degradation of CKIs to target cki-1 for degradation. CBC(zif-1) may ensure germline precursor cell [...] | 0.624 |
F53G2.1 | elb-1 | F53G2.1.1 | Y41C4A.10.1 | Uncharacterized protein. | RNA polymerase II transcription factor SIII p18 subunit. | 0.598 |
F53G2.1 | gadr-3 | F53G2.1.1 | F47D12.5.1 | Uncharacterized protein. | Gastrulation-defective protein 3. | 0.671 |
F53G2.1 | gadr-4 | F53G2.1.1 | W06A11.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.630 |
F53G2.1 | vhl-1 | F53G2.1.1 | F08G12.4.1 | Uncharacterized protein. | Von Hippel-Lindau tumor suppressor homolog; Involved in the response to variation in environmental oxygen levels by targeting the hypoxia-inducible transcription factor hif-1 for proteasomal degradation when oxygen levels are normal (around 20%). By regulating hif-1 expression, plays a role in iron homeostasis, aging, heat acclimation and progeny size. Mediates resistance to enteropathogenic E.coli. Mediates susceptibility to B.thuringiensis pore-forming toxins. Not involved in P.aeruginosa susceptibility. Belongs to the VHL family. | 0.628 |
F53G2.1 | zer-1 | F53G2.1.1 | T24C4.6b.1 | Uncharacterized protein. | Zyg eleven-related protein 1; Acts as target recruitment subunit in the E3 ubiquitin ligase complex zer-1-cul-2-elc-1. | 0.638 |
F58D2.2 | C48D1.1 | F58D2.2.1 | C48D1.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
F58D2.2 | F58D2.4 | F58D2.2.1 | F58D2.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
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