Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
clec-222 | clec-223 | C03E10.6.1 | C03E10.5.1 | C-type LECtin. | C-type LECtin. | 0.855 |
clec-222 | cof-2 | C03E10.6.1 | C48E7.5.1 | C-type LECtin. | Collagen/olfactomedin domain containing protein 2. | 0.699 |
clec-223 | clec-222 | C03E10.5.1 | C03E10.6.1 | C-type LECtin. | C-type LECtin. | 0.855 |
clec-223 | cof-2 | C03E10.5.1 | C48E7.5.1 | C-type LECtin. | Collagen/olfactomedin domain containing protein 2. | 0.660 |
cof-2 | clec-222 | C48E7.5.1 | C03E10.6.1 | Collagen/olfactomedin domain containing protein 2. | C-type LECtin. | 0.699 |
cof-2 | clec-223 | C48E7.5.1 | C03E10.5.1 | Collagen/olfactomedin domain containing protein 2. | C-type LECtin. | 0.660 |
cof-2 | gly-15 | C48E7.5.1 | C54C8.11a.1 | Collagen/olfactomedin domain containing protein 2. | GLYcosylation related. | 0.669 |
cof-2 | lron-8 | C48E7.5.1 | T22E7.1a.1 | Collagen/olfactomedin domain containing protein 2. | LRRCT domain-containing protein. | 0.498 |
cof-2 | ten-1 | C48E7.5.1 | R13F6.4e.1 | Collagen/olfactomedin domain containing protein 2. | Teneurin-1; Plays a role in the gonadal basement membrane maintenance and/or adhesion early in development. Contributes to the guidance of pharyngeal neurons. | 0.624 |
cof-2 | unc-5 | C48E7.5.1 | B0273.4c.1 | Collagen/olfactomedin domain containing protein 2. | Netrin receptor unc-5; Receptor for netrin (unc-6) required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon migration is mediated by the secreted unc-6, which promotes attraction of neurons and axons through binding to the unc-40 receptor, while repulsion requires both unc-5 and unc-40 receptors. Involved in the ventral-dorsal and anterior-posterior migration of distal tip cells along the body, which may be mediated by Wnt receptor mom-5, ced- 10/Rac, ced-12/ELMO and mig-2/RhoG. | 0.565 |
gly-15 | cof-2 | C54C8.11a.1 | C48E7.5.1 | GLYcosylation related. | Collagen/olfactomedin domain containing protein 2. | 0.669 |
lron-8 | cof-2 | T22E7.1a.1 | C48E7.5.1 | LRRCT domain-containing protein. | Collagen/olfactomedin domain containing protein 2. | 0.498 |
ten-1 | cof-2 | R13F6.4e.1 | C48E7.5.1 | Teneurin-1; Plays a role in the gonadal basement membrane maintenance and/or adhesion early in development. Contributes to the guidance of pharyngeal neurons. | Collagen/olfactomedin domain containing protein 2. | 0.624 |
unc-5 | cof-2 | B0273.4c.1 | C48E7.5.1 | Netrin receptor unc-5; Receptor for netrin (unc-6) required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon migration is mediated by the secreted unc-6, which promotes attraction of neurons and axons through binding to the unc-40 receptor, while repulsion requires both unc-5 and unc-40 receptors. Involved in the ventral-dorsal and anterior-posterior migration of distal tip cells along the body, which may be mediated by Wnt receptor mom-5, ced- 10/Rac, ced-12/ELMO and mig-2/RhoG. | Collagen/olfactomedin domain containing protein 2. | 0.565 |