STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-88Homeobox domain-containing protein. (262 aa)    
Predicted Functional Partners:
ceh-99
Homeobox domain-containing protein.
      
 0.692
ceh-84
Homeobox domain-containing protein.
      
 0.691
ceh-81
Homeobox domain-containing protein.
      
 0.691
ceh-100
C. Elegans Homeobox.
      
 0.691
duxl-1
DUX (Vertebrate dual homeobox) Like.
      
 0.690
ceh-92
C. Elegans Homeobox.
      
 0.670
ceh-74
Homeobox domain-containing protein.
      
 0.668
ceh-91
C. Elegans Homeobox.
      
 0.666
nhr-61
Nuclear hormone receptor family member nhr-61; Orphan nuclear receptor.
   
  
 0.664
srsx-34
Serpentine Receptor, class SX.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.