STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-35A4CYtochrome P450 family; Belongs to the cytochrome P450 family. (494 aa)    
Predicted Functional Partners:
cyp-35A3
CYtochrome P450 family; Belongs to the cytochrome P450 family.
  
  
0.909
pks-1
PolyKetide Synthase.
  
 0.811
nhr-234
Nuclear Hormone Receptor family; Belongs to the nuclear hormone receptor family.
    
 
 0.672
hxk-3
Phosphotransferase.
   
  
 0.663
spp-20
Saposin B-type domain-containing protein.
      
 0.660
Y75B8A.28
Uncharacterized protein.
      
 0.660
cyp-35C1
CYtochrome P450 family; Belongs to the cytochrome P450 family.
  
  
0.615
cyp-43A1
CYtochrome P450 family; Belongs to the cytochrome P450 family.
  
 
 0.553
irg-2
Infection Response protein.
      
 0.536
acs-2
Fatty Acid CoA Synthetase family.
  
 0.536
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.