Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C49H3.3 | F10E9.11 | C49H3.3.1 | F10E9.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.648 |
C49H3.3 | Y48A6B.3 | C49H3.3.1 | Y48A6B.3.1 | Uncharacterized protein. | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | 0.683 |
C49H3.3 | Y56A3A.18 | C49H3.3.1 | Y56A3A.18.1 | Uncharacterized protein. | Zinc finger protein 593 homolog; Belongs to the ZNF593/BUD20 C2H2-type zinc-finger protein family. | 0.680 |
C49H3.3 | ZK1127.4 | C49H3.3.1 | ZK1127.4.1 | Uncharacterized protein. | Protein BCCIP homolog; Belongs to the BCP1 family. | 0.655 |
C49H3.3 | ZK686.1 | C49H3.3.1 | ZK686.1.1 | Uncharacterized protein. | Uncharacterized protein ZK686.1. | 0.638 |
C49H3.3 | nol-16 | C49H3.3.1 | ZK265.6.1 | Uncharacterized protein. | Nucleolar protein 16. | 0.753 |
C49H3.3 | rpac-19 | C49H3.3.1 | F58A4.9.2 | Uncharacterized protein. | Probable DNA-directed RNA polymerases I and III subunit RPAC2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common core component of RNA polymerases I and III which synthesize ribosomal RNA precursors and small RNAs, such as 5S rRNA and tRNAs, respectively (By similarity). | 0.684 |
C49H3.3 | rpl-14 | C49H3.3.1 | C04F12.4.2 | Uncharacterized protein. | Ribosomal_L14e domain-containing protein. | 0.646 |
C49H3.3 | rpl-30 | C49H3.3.1 | Y106G6H.3a.1 | Uncharacterized protein. | Ribosomal_L7Ae domain-containing protein. | 0.782 |
C49H3.3 | rpl-43 | C49H3.3.1 | Y48B6A.2.3 | Uncharacterized protein. | 60S ribosomal protein L37a; Belongs to the eukaryotic ribosomal protein eL43 family. | 0.640 |
F10E9.11 | C49H3.3 | F10E9.11.1 | C49H3.3.1 | Uncharacterized protein. | Uncharacterized protein. | 0.648 |
Y48A6B.3 | C49H3.3 | Y48A6B.3.1 | C49H3.3.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Uncharacterized protein. | 0.683 |
Y48A6B.3 | Y56A3A.18 | Y48A6B.3.1 | Y56A3A.18.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Zinc finger protein 593 homolog; Belongs to the ZNF593/BUD20 C2H2-type zinc-finger protein family. | 0.900 |
Y48A6B.3 | ZK1127.4 | Y48A6B.3.1 | ZK1127.4.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Protein BCCIP homolog; Belongs to the BCP1 family. | 0.585 |
Y48A6B.3 | ZK686.1 | Y48A6B.3.1 | ZK686.1.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Uncharacterized protein ZK686.1. | 0.790 |
Y48A6B.3 | nol-16 | Y48A6B.3.1 | ZK265.6.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Nucleolar protein 16. | 0.719 |
Y48A6B.3 | rpac-19 | Y48A6B.3.1 | F58A4.9.2 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Probable DNA-directed RNA polymerases I and III subunit RPAC2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common core component of RNA polymerases I and III which synthesize ribosomal RNA precursors and small RNAs, such as 5S rRNA and tRNAs, respectively (By similarity). | 0.909 |
Y48A6B.3 | rpl-14 | Y48A6B.3.1 | C04F12.4.2 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Ribosomal_L14e domain-containing protein. | 0.768 |
Y48A6B.3 | rpl-30 | Y48A6B.3.1 | Y106G6H.3a.1 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | Ribosomal_L7Ae domain-containing protein. | 0.805 |
Y48A6B.3 | rpl-43 | Y48A6B.3.1 | Y48B6A.2.3 | Putative H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs (By similarity). | 60S ribosomal protein L37a; Belongs to the eukaryotic ribosomal protein eL43 family. | 0.888 |
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