Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccf-1 | ccr-4 | Y56A3A.20.1 | ZC518.3d.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | Endo/exonuclease/phosphatase domain-containing protein. | 0.999 |
| ccf-1 | cgh-1 | Y56A3A.20.1 | C07H6.5.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | 0.990 |
| ccf-1 | let-711 | Y56A3A.20.1 | F57B9.2a.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | Not1 domain-containing protein. | 0.999 |
| ccf-1 | ntl-2 | Y56A3A.20.1 | B0286.4a.2 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | NOT2_3_5 domain-containing protein. | 0.994 |
| ccf-1 | ntl-3 | Y56A3A.20.1 | Y56A3A.1a.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | NOT2_3_5 domain-containing protein. | 0.994 |
| ccf-1 | ntl-4 | Y56A3A.20.1 | C49H3.5d.2 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | NOT-Like (Yeast CCR4/NOT complex component). | 0.990 |
| ccf-1 | ntl-9 | Y56A3A.20.1 | C26E6.3.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | NOT-Like (Yeast CCR4/NOT complex component). | 0.999 |
| ccf-1 | tag-153 | Y56A3A.20.1 | F44A2.1b.1 | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | NOT2_3_5 domain-containing protein. | 0.988 |
| ccr-4 | ccf-1 | ZC518.3d.1 | Y56A3A.20.1 | Endo/exonuclease/phosphatase domain-containing protein. | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | 0.999 |
| ccr-4 | cgh-1 | ZC518.3d.1 | C07H6.5.1 | Endo/exonuclease/phosphatase domain-containing protein. | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | 0.918 |
| ccr-4 | let-711 | ZC518.3d.1 | F57B9.2a.1 | Endo/exonuclease/phosphatase domain-containing protein. | Not1 domain-containing protein. | 0.999 |
| ccr-4 | ntl-2 | ZC518.3d.1 | B0286.4a.2 | Endo/exonuclease/phosphatase domain-containing protein. | NOT2_3_5 domain-containing protein. | 0.972 |
| ccr-4 | ntl-3 | ZC518.3d.1 | Y56A3A.1a.1 | Endo/exonuclease/phosphatase domain-containing protein. | NOT2_3_5 domain-containing protein. | 0.977 |
| ccr-4 | ntl-4 | ZC518.3d.1 | C49H3.5d.2 | Endo/exonuclease/phosphatase domain-containing protein. | NOT-Like (Yeast CCR4/NOT complex component). | 0.957 |
| ccr-4 | ntl-9 | ZC518.3d.1 | C26E6.3.1 | Endo/exonuclease/phosphatase domain-containing protein. | NOT-Like (Yeast CCR4/NOT complex component). | 0.974 |
| ccr-4 | tag-153 | ZC518.3d.1 | F44A2.1b.1 | Endo/exonuclease/phosphatase domain-containing protein. | NOT2_3_5 domain-containing protein. | 0.885 |
| cgh-1 | ccf-1 | C07H6.5.1 | Y56A3A.20.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | CCR4-NOT transcription complex subunit 7; Catalytic component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression; Belongs to the CAF1 family. | 0.990 |
| cgh-1 | ccr-4 | C07H6.5.1 | ZC518.3d.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Endo/exonuclease/phosphatase domain-containing protein. | 0.918 |
| cgh-1 | let-711 | C07H6.5.1 | F57B9.2a.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Not1 domain-containing protein. | 0.994 |
| cgh-1 | mtr-4 | C07H6.5.1 | W08D2.7.1 | ATP-dependent RNA helicase cgh-1; Probable RNA helicase required for oocyte and sperm function. Also required to prevent the physiological germline apoptosis mechanism killing essentially all developing oocytes. Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | mRNA transport homolog 4. | 0.534 |
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