STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srh-18Serpentine Receptor, class H. (329 aa)    
Predicted Functional Partners:
sto-3
Stomatin-3.
      
 0.801
gcy-13
Receptor-type guanylate cyclase gcy-13; Guanylate cyclase involved in the production of the second messenger cGMP (By similarity).
   
  
 0.699
sri-9
Serpentine Receptor, class I.
      
 0.698
glr-6
PBPe domain-containing protein.
      
 0.660
flp-26
FMRFamide-like neuropeptides 26; FMRFamides and FMRFamide-like peptides are neuropeptides.
      
 0.660
inx-1
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
      
 0.428
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.