Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F10B5.2 | ddx-23 | F10B5.2.1 | F01F1.7.1 | Protein AAR2 homolog; Belongs to the AAR2 family. | DEAD boX helicase homolog; Belongs to the DEAD box helicase family. | 0.842 |
F10B5.2 | eftu-2 | F10B5.2.1 | ZK328.2.1 | Protein AAR2 homolog; Belongs to the AAR2 family. | Tr-type G domain-containing protein. | 0.959 |
F10B5.2 | prp-6 | F10B5.2.1 | Y59A8B.6.1 | Protein AAR2 homolog; Belongs to the AAR2 family. | Yeast PRP (Splicing factor) related. | 0.590 |
F10B5.2 | prp-8 | F10B5.2.1 | C50C3.6.1 | Protein AAR2 homolog; Belongs to the AAR2 family. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.994 |
F10B5.2 | snrp-200 | F10B5.2.1 | Y46G5A.4.1 | Protein AAR2 homolog; Belongs to the AAR2 family. | Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; Putative RNA helicase involved in the second step of RNA splicing; Belongs to the helicase family. SKI2 subfamily. | 0.947 |
F19F10.9 | M03F8.3 | F19F10.9.1 | M03F8.3b.1 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
F19F10.9 | ddx-23 | F19F10.9.1 | F01F1.7.1 | Uncharacterized protein. | DEAD boX helicase homolog; Belongs to the DEAD box helicase family. | 0.982 |
F19F10.9 | eftu-2 | F19F10.9.1 | ZK328.2.1 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.997 |
F19F10.9 | prp-3 | F19F10.9.1 | M03C11.7.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.997 |
F19F10.9 | prp-6 | F19F10.9.1 | Y59A8B.6.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.998 |
F19F10.9 | prp-8 | F19F10.9.1 | C50C3.6.1 | Uncharacterized protein. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.994 |
F19F10.9 | rsr-2 | F19F10.9.1 | Y57A10A.19.1 | Uncharacterized protein. | Cwf21 domain-containing protein. | 0.581 |
F19F10.9 | snrp-200 | F19F10.9.1 | Y46G5A.4.1 | Uncharacterized protein. | Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; Putative RNA helicase involved in the second step of RNA splicing; Belongs to the helicase family. SKI2 subfamily. | 0.994 |
M03F8.3 | F19F10.9 | M03F8.3b.1 | F19F10.9.1 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
M03F8.3 | ddx-23 | M03F8.3b.1 | F01F1.7.1 | Uncharacterized protein. | DEAD boX helicase homolog; Belongs to the DEAD box helicase family. | 0.953 |
M03F8.3 | eftu-2 | M03F8.3b.1 | ZK328.2.1 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.998 |
M03F8.3 | isy-1 | M03F8.3b.1 | F53B7.3.2 | Uncharacterized protein. | Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family. | 0.999 |
M03F8.3 | prp-6 | M03F8.3b.1 | Y59A8B.6.1 | Uncharacterized protein. | Yeast PRP (Splicing factor) related. | 0.409 |
M03F8.3 | prp-8 | M03F8.3b.1 | C50C3.6.1 | Uncharacterized protein. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.995 |
M03F8.3 | rsr-2 | M03F8.3b.1 | Y57A10A.19.1 | Uncharacterized protein. | Cwf21 domain-containing protein. | 0.931 |
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