STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C50F4.1CHK domain-containing protein. (362 aa)    
Predicted Functional Partners:
C13A2.5
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
      
 0.850
str-86
Seven TM Receptor.
      
 0.850
pals-28
Protein containing ALS2cr12 (ALS2CR12) signature.
      
 0.809
Y75B8A.39
Uncharacterized protein.
      
 0.809
C13A2.1
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
      
 0.807
F26F2.3
Uncharacterized protein.
    
 
 0.799
ddn-1
Downstream of Daf-Nineteen.
      
 0.700
B0507.8
Uncharacterized protein.
      
 0.699
pals-6
Protein containing ALS2cr12 (ALS2CR12) signature.
      
 0.697
rsp-7
Probable splicing factor, arginine/serine-rich 7.
      
 0.670
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.