C50F4.4 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C50F4.4

Uncharacterized protein. (187 aa)

Predicted Functional Partners:

R08E3.3

0.918

ZC155.2

0.896

C16A11.2

0.889

F47B8.3

0.882

F49H12.4

0.805

T28F2.2

0.758

F58B3.6

0.672

vps-29

0.639

C31E10.5

0.626

C31E10.6

0.625

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C16A11.2	C50F4.4	C16A11.2a.2	C50F4.4.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.889
C16A11.2	F58B3.6	C16A11.2a.2	F58B3.6.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.451
C16A11.2	R08E3.3	C16A11.2a.2	R08E3.3b.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.952
C16A11.2	T28F2.2	C16A11.2a.2	T28F2.2b.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.770
C16A11.2	vps-29	C16A11.2a.2	ZK1128.8b.1	KOG2701 domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.782
C31E10.5	C50F4.4	C31E10.5.1	C50F4.4.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.626
C31E10.5	F58B3.6	C31E10.5.1	F58B3.6.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.454
C31E10.5	R08E3.3	C31E10.5.1	R08E3.3b.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.798
C31E10.5	vps-29	C31E10.5.1	ZK1128.8b.1	KOG2701 domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.576
C31E10.6	C50F4.4	C31E10.6.1	C50F4.4.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.625
C31E10.6	F58B3.6	C31E10.6.1	F58B3.6.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.445
C31E10.6	R08E3.3	C31E10.6.1	R08E3.3b.1	KOG2701 domain-containing protein.	Uncharacterized protein.	0.785
C31E10.6	vps-29	C31E10.6.1	ZK1128.8b.1	KOG2701 domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.567
C50F4.4	C16A11.2	C50F4.4.1	C16A11.2a.2	Uncharacterized protein.	KOG2701 domain-containing protein.	0.889
C50F4.4	C31E10.5	C50F4.4.1	C31E10.5.1	Uncharacterized protein.	KOG2701 domain-containing protein.	0.626
C50F4.4	C31E10.6	C50F4.4.1	C31E10.6.1	Uncharacterized protein.	KOG2701 domain-containing protein.	0.625
C50F4.4	F47B8.3	C50F4.4.1	F47B8.3.1	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.882
C50F4.4	F49H12.4	C50F4.4.1	F49H12.4.1	Uncharacterized protein.	Uncharacterized protein.	0.805
C50F4.4	F58B3.6	C50F4.4.1	F58B3.6.1	Uncharacterized protein.	Uncharacterized protein.	0.672
C50F4.4	R08E3.3	C50F4.4.1	R08E3.3b.1	Uncharacterized protein.	Uncharacterized protein.	0.918