STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C50F4.9Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
col-63
Col_cuticle_N domain-containing protein.
      
 0.758
F01D5.2
Uncharacterized protein.
   
  
 0.704
col-98
Col_cuticle_N domain-containing protein.
      
 0.700
ugt-66
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.699
clec-61
C-type LECtin.
   
  
 0.695
Y65B4BR.1
Lipase_GDSL domain-containing protein.
   
  
 0.661
C30G12.2
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.660
irg-6
CUB_2 domain-containing protein.
      
 0.660
F55G11.2
CUB_2 domain-containing protein.
      
 0.660
irg-3
Infection Response protein.
      
 0.617
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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