STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C52B9.8Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
swsn-2.2
SWIB domain-containing protein.
    
 
 0.822
dpff-1
Zinc finger protein dpff-1; Belongs to the requiem/DPF family.
      
 0.811
ehn-3
Zinc finger protein ehn-3; Together with the zinc finger protein ztf-16, plays a role in gonadogenesis, specifically in somatic gonad precursor cell development. This is possibly by regulating tra-1 gene expression. Belongs to the krueppel C2H2-type zinc-finger protein family.
      
 0.807
ham-3
SWIB domain-containing protein.
   
  
 0.804
swsn-9
Bromo domain-containing protein.
   
 
 0.771
swsn-4
SWI/SNF nucleosome remodeling complex component.
 
 
  
 0.697
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.