STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C52E4.7Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
rnh-1.1
RNase H domain-containing protein.
  
 
 0.639
ssp-16
Sperm-specific class P protein 16.
   
 
 0.632
msd-4
MSP domain-containing protein.
   
 
 0.616
msd-2
Major Sperm protein Domain containing.
   
 
 0.599
F36A4.4
Uncharacterized protein.
   
    0.593
K07A1.4
Uncharacterized protein.
   
    0.593
C05C12.5
Uncharacterized protein.
   
    0.592
C54D10.4
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
   
    0.592
pfk-1.2
ATP-dependent 6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
 0.591
msd-1
Major Sperm protein Domain containing.
   
 
 0.591
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.