STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C53C11.1Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
Y39E4B.10
Uncharacterized protein.
   
    0.592
Y71H2B.8
Uncharacterized protein.
   
    0.592
Y47H10A.2
FBA_2 domain-containing protein.
   
    0.584
Y82E9BR.20
Uncharacterized protein.
   
    0.584
T24D5.1
Uncharacterized protein.
   
    0.573
C15C6.3
Uncharacterized protein.
   
    0.572
sra-33
Serpentine receptor class alpha-33.
   
    0.571
str-253
Seven TM Receptor.
   
    0.569
R12B2.6
Uncharacterized protein R12B2.6.
   
    0.566
nhr-81
Nuclear Hormone Receptor family.
   
    0.565
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.