STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C53H9.3Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
tag-96
GHMP_kinases_C domain-containing protein.
      
 0.851
Y51F10.4
Aa_trans domain-containing protein.
      
 0.851
Y71G12B.18
Methyltransf_21 domain-containing protein.
      
 0.851
Y71G12B.31
Tyrosine-protein phosphatase.
      
 0.851
Y71G12B.33
Uncharacterized protein.
      
 0.851
Y71G12B.35
Uncharacterized protein.
      
 0.851
Y71G12B.25
MFS domain-containing protein.
      
 0.850
spe-48
UBA domain-containing protein.
      
 0.815
Y71G12B.23
Uncharacterized protein.
      
 0.813
tub-2
WD_REPEATS_REGION domain-containing protein; Belongs to the TUB family.
      
 0.697
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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