STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C54C6.6Cilia- and flagella-associated protein 20; Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility; Belongs to the CFAP20 family. (203 aa)    
Predicted Functional Partners:
pcrg-1
Parkin Co-Regulated Gene (PACRG) homolog.
    
 
 0.936
efhc-1
EF-Hand domain-Containing protein 1 homolog.
    
 
 0.922
Y34B4A.10
Uncharacterized protein.
      
 0.880
grd-7
Ground-like domain-containing protein.
      
 0.808
rps-13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.695
miro-1
Mitochondrial Rho GTPase 1; Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.
   
 
 0.695
cpn-1
Calponin-homology (CH) domain-containing protein.
   
 
 0.685
cpn-2
Transgelin; Belongs to the calponin family.
    
 
 0.679
cpn-3
Calponin-homology (CH) domain-containing protein.
    
 
 0.679
cpn-4
Calponin-homology (CH) domain-containing protein.
    
 
 0.679
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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