STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C54F6.12DUF19 domain-containing protein. (195 aa)    
Predicted Functional Partners:
C33A12.19
Uncharacterized protein.
      
 0.886
K08C7.4
Uncharacterized protein.
      
 0.850
Y47H9C.1
Uncharacterized protein.
      
 0.815
clec-52
C-type LECtin.
      
 0.664
clec-221
C-type lectin domain-containing protein.
      
 0.570
clec-118
C-type lectin domain-containing protein.
      
 0.570
clec-125
C-type lectin domain-containing protein.
      
 0.570
clec-187
C-type LECtin.
      
 0.570
fmo-2
Dimethylaniline monooxygenase [N-oxide-forming].
   
  
 0.556
clec-9
C-type LECtin.
      
 0.550
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.