STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C54G4.4Uncharacterized protein. (868 aa)    
Predicted Functional Partners:
clec-151
C-type lectin domain-containing protein.
      
 0.960
clec-34
C-type LECtin.
      
 0.960
clec-29
C-type LECtin.
      
 0.960
clec-1
C-type lectin domain-containing protein.
      
 0.758
clec-39
C-type LECtin.
      
 0.741
clec-86
C-type lectin domain-containing protein.
      
 0.699
clec-17
C-type LECtin.
      
 0.699
clec-49
C-type LECtin.
      
 0.698
clec-174
C-type lectin domain-containing protein.
      
 0.698
clec-65
C-type LECtin.
    
 
 0.693
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.