STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C54G6.3Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
gei-13
Gex-3-interacting protein 13.
      
 0.935
C54G6.2
C-CAP/cofactor C-like domain-containing protein.
 
 
  
 0.838
swip-10
Lactamase_B domain-containing protein.
      
 0.807
mlt-8
Uncharacterized protein.
      
 0.807
npr-10
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.734
C07A9.10
Uncharacterized protein C07A9.10.
   
    0.538
nhr-25
Nuclear hormone receptor family member nhr-25; Orphan nuclear receptor required during development. Plays a role in male tail tip morphogenesis regulating the expression of the transcription factor dmd-3 in a negative feedback loop.
      
 0.465
srz-12
Serpentine Receptor, class Z.
   
    0.454
fbxa-160
FTH domain-containing protein.
   
    0.442
sri-61
Serpentine Receptor, class I.
   
    0.430
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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