STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgx-1Lin-12 and Glp-1 X-hybridizing. (1884 aa)    
Predicted Functional Partners:
chs-2
Chitin synthase chs-2; May be involved in chitin synthesis in the pharynx during larval development; Belongs to the chitin synthase family. Class IV subfamily.
   
  
 0.816
chs-1
Chitin synthase chs-1; Essential for the embryonic synthesis of chitin, a component of the eggshell.
      
 0.708
F30H5.3
Uncharacterized protein.
   
   
0.543
F40E10.5
Uncharacterized protein.
   
    0.538
K04H4.2
Uncharacterized protein K04H4.2.
   
    0.531
pqn-13
Prion-like-(Q/N-rich)-domain-bearing protein.
   
    0.491
C18E9.7
Uncharacterized protein.
   
   0.480
F48E3.8
Uncharacterized protein.
   
  
0.457
F49E10.2
Uncharacterized protein.
   
    0.455
lgc-27
Neur_chan_LBD domain-containing protein.
   
    0.422
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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