STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C56C10.11annotation not available (753 aa)    
Predicted Functional Partners:
epg-5
Ectopic P granules protein 5; Involved in the maturation of autophagosomes into autolysosomes during starvation-induced autotrophy. Specifically, involved in the clearance of apoptotic cells by promoting the delivery of engulfed apoptotic cells to the lysosome.
 
    
 0.913
dnj-8
J domain-containing protein.
 
  
 
 0.880
R07E4.5
Uncharacterized protein.
   
  
 0.806
C16C8.11
Ubiquitin-like domain-containing protein.
      
 0.801
F14H3.5
Uncharacterized protein.
      
 0.801
msrp-2
MS Related Protein.
      
 0.801
Y54E2A.4
SEC63 domain-containing protein.
    
 
 0.776
nkat-3
Aminotran_1_2 domain-containing protein.
      
 0.759
metl-2
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.758
W09C5.7
SAC domain-containing protein.
   
  
 0.751
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.