STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C56G2.4Uncharacterized protein C56G2.4. (538 aa)    
Predicted Functional Partners:
mrpl-40
Mitochondrial Ribosomal Protein, Large.
   
 
 0.826
mrps-2
Mitochondrial Ribosomal Protein, Small.
  
 
 0.819
mrpl-16
Ribosomal_L16 domain-containing protein.
   
 
 0.812
mrpl-4
Mitochondrial Ribosomal Protein, Large.
   
 
 0.799
dap-3
Mammalian cell Death Associated Protein related.
   
 
 0.798
mrpl-19
Probable 39S ribosomal protein L19, mitochondrial.
   
 
 0.797
Y55F3BL.4
SRR1 domain-containing protein.
   
 
 0.796
mrpl-13
Mitochondrial Ribosomal Protein, Large.
  
 
 0.786
F02A9.10-2
Ribosomal protein L44, mitochondrial; Component of the mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome.
   
 
 0.785
mrps-10
Probable 28S ribosomal protein S10, mitochondrial; Ribosomal protein required for normal mitochondrial function and normal larval development. Thought to have a role in insulin/IGF signaling.
   
 
 0.782
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.