STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npr-8Probable G-protein coupled receptor npr-8; Not known. Putative receptor; Belongs to the G-protein coupled receptor 1 family. (510 aa)    
Predicted Functional Partners:
col-160
Col_cuticle_N domain-containing protein.
    
 
 0.781
str-182
Seven TM Receptor.
      
 0.759
col-179
Col_cuticle_N domain-containing protein.
    
 
 0.700
gtr-1
GPCR Thermal Receptor.
      
 0.699
col-116
Col_cuticle_N domain-containing protein.
    
 
 0.695
col-80
Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity).
    
 
 0.667
col-101
Col_cuticle_N domain-containing protein.
    
 
 0.667
dcar-1
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.666
col-64
Col_cuticle_N domain-containing protein.
    
 
 0.618
olrn-1
Uncharacterized protein.
      
 0.614
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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