Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C56G7.3 | ced-12 | C56G7.3a.1 | Y106G6E.5b.1 | ELMO domain-containing protein C56G7.3. | Cell death abnormality protein 12; Involved in programmed apoptosis and necrosis. Required for the cell corpse engulfment process. Has roles in the formation of actin halos and distal tip cell migration. Negatively regulates the unc-6/Netrin receptor unc-5 to control distal tip cell migration along the anterior-posterior axis of the body. Plays no role in amphid axon outgrowth. | 0.483 |
C56G7.3 | evl-20 | C56G7.3a.1 | F22B5.1.1 | ELMO domain-containing protein C56G7.3. | ADP-ribosylation factor-like protein 2; GTP-binding protein that functions in embryogenesis, cytokinesis, germline development and microtubulule cytoskeleton dynamics. | 0.481 |
C56G7.3 | tbc-9 | C56G7.3a.1 | Y45F10A.6a.1 | ELMO domain-containing protein C56G7.3. | Rab-GAP TBC domain-containing protein. | 0.416 |
C56G7.3 | tbcd-1 | C56G7.3a.1 | F16D3.4.1 | ELMO domain-containing protein C56G7.3. | Tubulin-specific chaperone D; Tubulin-folding protein; involved in the first step of the tubulin folding pathway (By similarity). Plays a role in microtubule polymerization ; Belongs to the TBCD family. | 0.403 |
ced-12 | C56G7.3 | Y106G6E.5b.1 | C56G7.3a.1 | Cell death abnormality protein 12; Involved in programmed apoptosis and necrosis. Required for the cell corpse engulfment process. Has roles in the formation of actin halos and distal tip cell migration. Negatively regulates the unc-6/Netrin receptor unc-5 to control distal tip cell migration along the anterior-posterior axis of the body. Plays no role in amphid axon outgrowth. | ELMO domain-containing protein C56G7.3. | 0.483 |
evl-20 | C56G7.3 | F22B5.1.1 | C56G7.3a.1 | ADP-ribosylation factor-like protein 2; GTP-binding protein that functions in embryogenesis, cytokinesis, germline development and microtubulule cytoskeleton dynamics. | ELMO domain-containing protein C56G7.3. | 0.481 |
evl-20 | tbcd-1 | F22B5.1.1 | F16D3.4.1 | ADP-ribosylation factor-like protein 2; GTP-binding protein that functions in embryogenesis, cytokinesis, germline development and microtubulule cytoskeleton dynamics. | Tubulin-specific chaperone D; Tubulin-folding protein; involved in the first step of the tubulin folding pathway (By similarity). Plays a role in microtubule polymerization ; Belongs to the TBCD family. | 0.962 |
tbc-9 | C56G7.3 | Y45F10A.6a.1 | C56G7.3a.1 | Rab-GAP TBC domain-containing protein. | ELMO domain-containing protein C56G7.3. | 0.416 |
tbcd-1 | C56G7.3 | F16D3.4.1 | C56G7.3a.1 | Tubulin-specific chaperone D; Tubulin-folding protein; involved in the first step of the tubulin folding pathway (By similarity). Plays a role in microtubule polymerization ; Belongs to the TBCD family. | ELMO domain-containing protein C56G7.3. | 0.403 |
tbcd-1 | evl-20 | F16D3.4.1 | F22B5.1.1 | Tubulin-specific chaperone D; Tubulin-folding protein; involved in the first step of the tubulin folding pathway (By similarity). Plays a role in microtubule polymerization ; Belongs to the TBCD family. | ADP-ribosylation factor-like protein 2; GTP-binding protein that functions in embryogenesis, cytokinesis, germline development and microtubulule cytoskeleton dynamics. | 0.962 |