STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlp-15Neuropeptide-Like Protein. (143 aa)    
Predicted Functional Partners:
nlp-9
Neuropeptide-Like Protein.
   
  
 0.875
nlp-3
Neuropeptide-Like Protein.
   
  
 0.836
nlp-21
Neuropeptide-Like Protein.
   
  
 0.833
nlp-12
Neuropeptide-Like Protein.
   
  
 0.801
nlp-8
Neuropeptide-Like Protein.
   
  
 0.783
nlp-20
Neuropeptide-Like Protein.
   
  
 0.760
nlp-5
Neuropeptide-Like Protein.
   
  
 0.753
flp-21
FMRF-Like Peptide.
   
  
 0.750
T28D6.4
ANK_REP_REGION domain-containing protein.
   
 
 0.732
nlp-7
Neuropeptide-like protein 7; May regulate lifespan in response to food availability and oxidative stress.
   
 
 0.723
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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