STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-48Ribosomal_S10 domain-containing protein. (186 aa)    
Predicted Functional Partners:
mrps-22
Mitochondrial Ribosomal Protein, Small.
   
 
 0.979
mrpl-36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.961
mrpl-51
39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.
   
 
 0.950
mrpl-20
Mitochondrial Ribosomal Protein, Large.
   
 
 0.947
mrpl-40
Mitochondrial Ribosomal Protein, Large.
   
 
 0.946
mrpl-13
Mitochondrial Ribosomal Protein, Large.
   
 
 0.945
mrpl-49
Probable 39S ribosomal protein L49, mitochondrial.
   
 
 0.945
mrps-18B
Mitochondrial Ribosomal Protein, Small.
   
 
 0.942
mrps-33
Mitochondrial Ribosomal Protein, Small.
   
 
 0.930
mrpl-30
Mitochondrial Ribosomal Protein, Large.
   
 
 0.930
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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