STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D1007.8Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
F54D10.5
Uncharacterized protein.
   
  
 0.808
C01G10.7
HpcH_HpaI domain-containing protein.
   
  
 0.739
trpp-5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi; Belongs to the TRAPP small subunits family. BET3 subfamily.
   
  
 0.739
C08F8.3
Uncharacterized protein.
   
  
 0.725
F41G3.6
Uncharacterized protein.
   
  
 0.722
ZK1067.3
Uncharacterized protein.
   
  
 0.722
B0261.7
Uncharacterized protein.
   
  
 0.721
B0464.9
Probable protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated; Belongs to the AB hydrolase superfamily.
   
  
 0.719
C24D10.4
Uncharacterized protein.
   
  
 0.719
C48B4.11
Uncharacterized protein C48B4.11.
   
  
 0.715
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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