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sro-1 protein (Caenorhabditis elegans) - STRING interaction network
"sro-1" - Serpentine Receptor, class O in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sro-1Serpentine Receptor, class O (Opsin); Protein SRO-1 (sro-1) mRNA, complete cds (425 aa)    
Predicted Functional Partners:
hlh-17
Helix Loop Helix; Protein HLH-17 (hlh-17) mRNA, complete cds (101 aa)
           
  0.633
srn-1
Serpentine Receptor, class N; Protein SRN-1 (srn-1) mRNA, complete cds (361 aa)
           
  0.574
srsx-30
Serpentine Receptor, class SX; Protein SRSX-30 (srsx-30) mRNA, complete cds (304 aa)
           
  0.574
srh-15
Serpentine Receptor, class H; Protein SRH-15 (srh-15) mRNA, complete cds (367 aa)
     
   
  0.562
lim-6
LIM domain family; Protein LIM-6, isoform b (316 aa)
       
 
  0.562
srbc-58
Serpentine Receptor, class BC (Class B-like); Protein SRBC-58 (srbc-58) mRNA, complete cds (291 aa)
           
  0.559
sru-48
Serpentine Receptor, class U; Protein SRU-48 (sru-48) mRNA, complete cds (331 aa)
           
  0.556
sra-28
Serpentine receptor class alpha-28; Protein SRA-28 (sra-28) mRNA, complete cds (341 aa)
           
  0.556
sri-9
Serpentine Receptor, class I; Protein SRI-9 (sri-9) mRNA, complete cds (347 aa)
           
  0.553
srm-2
Serpentine Receptor, class M; Protein SRM-2 (srm-2) mRNA, complete cds (336 aa)
           
  0.551
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, roundworm
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