STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D1054.9Uncharacterized protein. (611 aa)    
Predicted Functional Partners:
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.804
F40E10.5
Uncharacterized protein.
   
    0.593
F49E10.2
Uncharacterized protein.
   
    0.593
grl-5
Ground-like domain-containing protein.
   
    0.592
cyn-17
CYclophyliN.
   
    0.582
C06G1.2
Uncharacterized protein.
   
   0.570
R01E6.2
Uncharacterized protein.
   
    0.570
K04H4.2
Uncharacterized protein K04H4.2.
   
   0.564
ZC123.1
Uncharacterized protein.
   
   0.563
F30H5.3
Uncharacterized protein.
   
    0.562
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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