STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpn-2Transgelin; Belongs to the calponin family. (203 aa)    
Predicted Functional Partners:
F13A7.1
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
 
 0.729
F21C10.7
Uncharacterized protein.
   
 
 0.719
R05H10.1
Uncharacterized protein.
      
 0.695
C49A9.3
Uncharacterized protein.
   
  
 0.691
C49A9.9
Uncharacterized protein.
      
 0.691
pcrg-1
Parkin Co-Regulated Gene (PACRG) homolog.
    
 
 0.689
ssq-4
Sperm-Specific family, class Q.
   
 
 0.684
efhc-1
EF-Hand domain-Containing protein 1 homolog.
   
 
 0.684
C54C6.6
Cilia- and flagella-associated protein 20; Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility; Belongs to the CFAP20 family.
    
 
 0.679
otub-2
OTU domain-containing protein.
   
  
 0.670
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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