STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D1069.3Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
Y75B8A.24
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.920
ttc-7
TPR_REGION domain-containing protein.
    
 
 0.901
C27A7.5
ANK_REP_REGION domain-containing protein.
      
 0.517
Y43E12A.2
Zf-3CxxC domain-containing protein.
      
 0.508
xpo-2
Importin N-terminal domain-containing protein.
      
 0.508
efr-3
Protein EFR3 homolog; Belongs to the EFR3 family.
   
  
 0.432
C32D5.4
Uncharacterized protein C32D5.4.
      
 0.426
mars-1
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.417
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.