Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Y39B6A.1 | zhp-1 | Y39B6A.1.1 | F55A12.10.1 | Uncharacterized protein. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.850 |
Y39B6A.1 | zhp-2 | Y39B6A.1.1 | D1081.9.1 | Uncharacterized protein. | RING-type domain-containing protein. | 0.859 |
Y39B6A.1 | zhp-4 | Y39B6A.1.1 | Y39B6A.16.1 | Uncharacterized protein. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.850 |
cosa-1 | dsb-2 | Y71H2AM.7.1 | F26H11.6.1 | CrossOver Site Associated. | Double-Strand Break factor. | 0.897 |
cosa-1 | htp-1 | Y71H2AM.7.1 | F41H10.10.1 | CrossOver Site Associated. | HORMA domain-containing protein. | 0.858 |
cosa-1 | msh-5 | Y71H2AM.7.1 | F09E8.3a.1 | CrossOver Site Associated. | MutS protein homolog 5; Crucial component in meiotic recombination, functioning at some point after the initiation step of recombination. Plays a role in promoting the crossover outcome of meiotic recombination events. Required for formation of normal meiotic crossover, and crossover and chiasmata generated by artificially made DNA breaks. | 0.944 |
cosa-1 | rec-8 | Y71H2AM.7.1 | W02A2.6a.1 | CrossOver Site Associated. | Meiotic recombination protein rec-8; Plays a role in meiotic chromosome cohesion and segregation. Necessary for sister chromatid co- orientation and sister chromatid cohension until meiosis II. May also be required for repair of programmed meiotic double stranded breaks. During spermatogenesis, likely involved in spermatocyte centriole cohesion, thus preventing their separation during the second meiotic division. Belongs to the rad21 family. Highly divergent. | 0.712 |
cosa-1 | syp-1 | Y71H2AM.7.1 | F26D2.2.1 | CrossOver Site Associated. | Synaptonemal complex protein SYP-1. | 0.725 |
cosa-1 | syp-2 | Y71H2AM.7.1 | C24G6.1.1 | CrossOver Site Associated. | Uncharacterized protein. | 0.885 |
cosa-1 | zhp-1 | Y71H2AM.7.1 | F55A12.10.1 | CrossOver Site Associated. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.784 |
cosa-1 | zhp-2 | Y71H2AM.7.1 | D1081.9.1 | CrossOver Site Associated. | RING-type domain-containing protein. | 0.747 |
cosa-1 | zhp-4 | Y71H2AM.7.1 | Y39B6A.16.1 | CrossOver Site Associated. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.792 |
dsb-2 | cosa-1 | F26H11.6.1 | Y71H2AM.7.1 | Double-Strand Break factor. | CrossOver Site Associated. | 0.897 |
dsb-2 | htp-1 | F26H11.6.1 | F41H10.10.1 | Double-Strand Break factor. | HORMA domain-containing protein. | 0.745 |
dsb-2 | msh-5 | F26H11.6.1 | F09E8.3a.1 | Double-Strand Break factor. | MutS protein homolog 5; Crucial component in meiotic recombination, functioning at some point after the initiation step of recombination. Plays a role in promoting the crossover outcome of meiotic recombination events. Required for formation of normal meiotic crossover, and crossover and chiasmata generated by artificially made DNA breaks. | 0.751 |
dsb-2 | syp-2 | F26H11.6.1 | C24G6.1.1 | Double-Strand Break factor. | Uncharacterized protein. | 0.734 |
dsb-2 | zhp-1 | F26H11.6.1 | F55A12.10.1 | Double-Strand Break factor. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.682 |
dsb-2 | zhp-2 | F26H11.6.1 | D1081.9.1 | Double-Strand Break factor. | RING-type domain-containing protein. | 0.652 |
dsb-2 | zhp-4 | F26H11.6.1 | Y39B6A.16.1 | Double-Strand Break factor. | Zip (Yeast meiotic zipper) Homologous Protein. | 0.451 |
htp-1 | cosa-1 | F41H10.10.1 | Y71H2AM.7.1 | HORMA domain-containing protein. | CrossOver Site Associated. | 0.858 |
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