Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| K02C4.3 | drh-3 | K02C4.3a.1 | D2005.5.1 | Probable ubiquitin carboxyl-terminal hydrolase K02C4.3. | Dicer Related Helicase. | 0.917 |
| dcr-1 | drh-3 | K12H4.8.2 | D2005.5.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Dicer Related Helicase. | 0.925 |
| dcr-1 | ego-1 | K12H4.8.2 | F26A3.3.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA-directed RNA polymerase related EGO-1. | 0.738 |
| dcr-1 | eri-1 | K12H4.8.2 | T07A9.5b.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 3'-5' exonuclease eri-1; RNA exonuclease that acts as a negative regulator of RNA interference (RNAi). Probably acts by degrading the 3'-overhangs of short interfering RNAs (siRNAs). Its tissue specificity may help explain the inefficiency of neuronal RNAi. | 0.924 |
| dcr-1 | eri-5 | K12H4.8.2 | Y38F2AR.1a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Tudor domain-containing protein. | 0.739 |
| dcr-1 | rde-1 | K12H4.8.2 | K08H10.7.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA interference promoting factor RDE-1. | 0.970 |
| dcr-1 | rde-4 | K12H4.8.2 | T20G5.11.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA interference promoting factor. | 0.999 |
| dcr-1 | rrf-1 | K12H4.8.2 | F26A3.8a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase Family. | 0.797 |
| dcr-1 | rrf-3 | K12H4.8.2 | F10B5.7.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase Family. | 0.914 |
| drh-3 | K02C4.3 | D2005.5.1 | K02C4.3a.1 | Dicer Related Helicase. | Probable ubiquitin carboxyl-terminal hydrolase K02C4.3. | 0.917 |
| drh-3 | dcr-1 | D2005.5.1 | K12H4.8.2 | Dicer Related Helicase. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.925 |
| drh-3 | ego-1 | D2005.5.1 | F26A3.3.1 | Dicer Related Helicase. | RNA-directed RNA polymerase related EGO-1. | 0.981 |
| drh-3 | ekl-1 | D2005.5.1 | F22D6.6.1 | Dicer Related Helicase. | Uncharacterized protein. | 0.976 |
| drh-3 | eri-1 | D2005.5.1 | T07A9.5b.1 | Dicer Related Helicase. | 3'-5' exonuclease eri-1; RNA exonuclease that acts as a negative regulator of RNA interference (RNAi). Probably acts by degrading the 3'-overhangs of short interfering RNAs (siRNAs). Its tissue specificity may help explain the inefficiency of neuronal RNAi. | 0.905 |
| drh-3 | eri-5 | D2005.5.1 | Y38F2AR.1a.1 | Dicer Related Helicase. | Tudor domain-containing protein. | 0.876 |
| drh-3 | rde-1 | D2005.5.1 | K08H10.7.1 | Dicer Related Helicase. | RNA interference promoting factor RDE-1. | 0.867 |
| drh-3 | rde-4 | D2005.5.1 | T20G5.11.1 | Dicer Related Helicase. | RNA interference promoting factor. | 0.907 |
| drh-3 | rrf-1 | D2005.5.1 | F26A3.8a.1 | Dicer Related Helicase. | RNA-dependent RNA polymerase Family. | 0.953 |
| drh-3 | rrf-3 | D2005.5.1 | F10B5.7.1 | Dicer Related Helicase. | RNA-dependent RNA polymerase Family. | 0.871 |
| ego-1 | dcr-1 | F26A3.3.1 | K12H4.8.2 | RNA-directed RNA polymerase related EGO-1. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.738 |
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