STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2013.6GRAM domain-containing protein. (235 aa)    
Predicted Functional Partners:
cyc-1
Cytochrome c domain-containing protein.
   
 0.959
T02H6.11
Uncharacterized protein.
   
 0.950
isp-1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.888
F45H10.2
Uncharacterized protein.
   
 0.865
R07E4.3
Uncharacterized protein.
   
 0.865
acox-1.6
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
  
 0.852
ucr-1
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 0.832
mppb-1
Mitochondrial-processing peptidase subunit beta; Catalytic subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins (Probable). Preferentially, cleaves after an arginine at position P2 (Probable).
   
 0.831
acox-1.1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
  
 0.822
cox-6B
Cytochrome OXidase assembly protein.
   
 0.822
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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